CDS

Accession Number TCMCG016C16660
gbkey CDS
Protein Id OMO72610.1
Location 40138..41391
Organism Corchorus capsularis
locus_tag CCACVL1_17684

Protein

Length 417aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011409.1
Definition Spo11/DNA topoisomerase VI, subunit A [Corchorus capsularis]
Locus_tag CCACVL1_17684

EGGNOG-MAPPER Annotation

COG_category L
Description Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10878        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04113        [VIEW IN KEGG]
map04113        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000706        [VIEW IN EMBL-EBI]
GO:0000729        [VIEW IN EMBL-EBI]
GO:0001708        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003918        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004520        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008544        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009913        [VIEW IN EMBL-EBI]
GO:0009957        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0016889        [VIEW IN EMBL-EBI]
GO:0016894        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030855        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0042138        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045165        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0061505        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGACAAGAAGAAGCGCCGCCGAACTGATTCGGACTCCGATTCCCAACCTTTCAAGCACCTTCTCAAATCCGACGAACAGATTCTTCAAGTGCTGAAGTCCTTCAGCTCCTCCTTCGCTTCCTCCTCCACTTCAAAACCCTTAACCCTAGCCGACCTCTCCTTAGCCTCCACCTGTCGGGAAGTTTCCGACCTTCCCCTCTCCTCTGTCCAATCCAACATCGAATCCCTAGTCCTGCAGCTCGCCCATCAAATCCTCTCCGGACAAGGGTTCTCCTTCACCGTCCCTTCCCGCGCCTCCACCAACCAGCTCTACGTTCCGGAACTCGACCGGATCGTGTTGAAAGATAAATCCACAATTCGCCCTTTCTCCCACATTTCCTCAGTTCGCAAAACCACAATAACCACCAAAATCCTCTCTTTAATCCACCAACTAAGTCTCAAAAACATTCATGTCACCAAGCGTGACCTTTTCTACACCGATGTCAAGCTCTTCCAAGACCAGATGCAATCGGACGCTGTTCTTGACGATGTTTCCTGTATGCTCGGCTGTACTCGCTCCAGCCTCAATGTAATCGCTGCTGAGAAAGGGGTCGTCGTTGGAAGACTTATTTTTAGTGACAATGGGGATATGATTGATTGTACTAAGATGGGAATGGGAGGAAAAGCAATTCCTCCTAACATTGATCGAGTTGGAGATATGCAAAGCGATGCACTGTTTATTCTGTTGGTGGAAAAGGATGCAGCTTACATTAGATTGGCTGAGGATAGGTTTTATAATCGGTTCCCTTGTATCATTGTGACTGCAAAAGGGCAGCCTGATGTGGCAACTAGGTTGTTTTTGAAGAAAATGAAGACTGAGTTAAAGCTTCCTGTATTGGCATTGGTGGATAGTGATCCTTATGGGTTAAAAATTCTGTCTGTCTATGGGTGTGGATCGAAGAACATGTCTTATGACAGTGCCAATTTGACCACACCTGATATCAAGTGGTTGGGAATTAGGCCCAGTGATTTGGATAAGTATAAGATACCAGAGCAATGCAGGTTGCCGATGACAGAGCAGGATATTAAGACCGGGAAGGATTTGCTGGAGGAGGACTTTGTCAAGAAGAATCCTGCTTGGGTTGAGGAGTTGAATTTGATGGTGAAGACTAAGCAGAAGGCTGAGATTCAGGCGCTGAGTTCATTCGGGTTTCAATACTTGTCTGAGGTTTATTTGCCATTGAAGTTGCAGCAGCAGGACTGGATATGA
Protein:  
MADKKKRRRTDSDSDSQPFKHLLKSDEQILQVLKSFSSSFASSSTSKPLTLADLSLASTCREVSDLPLSSVQSNIESLVLQLAHQILSGQGFSFTVPSRASTNQLYVPELDRIVLKDKSTIRPFSHISSVRKTTITTKILSLIHQLSLKNIHVTKRDLFYTDVKLFQDQMQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLKKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPAWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWI